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The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts
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Metadata
Document Title
The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts
Author
Jayasiri SC, Hyde KD, Ariyawansa HA, Bhat J, Buyck B, Cai L, Dai YC, Abd-Elsalam KA, Ertz D, Hidayat I, Jeewon R, Jones EBG, Bahkali AH, Karunarathna SC, Liu JK, Luangsa-Ard JJ, Lumbsch HT, Maharachchikumbura SSN, McKenzie EHC, Moncalvo JM, Ghobad-Nejhad M, Nilsson H, Pang KL, Pereira OL, Phillips AJL, Raspe O, Rollins AW, Romero AI, Etayo J, Selcuk F, Stephenson SL, Suetrong S, Taylor JE, Tsui CKM, Vizzini A, Abdel-Wahab MA, Wen TC, Boonmee S, Dai DQ, Daranagama DA, Dissanayake AJ, Ekanayaka AH, Fryar SC, Hongsanan S, Jayawardena RS, Li WJ, Perera RH, Phookamsak R, De Silva NI, Thambugala KM, Tian Q, Wijayawardene NN, Zhao RL, Zhao Q, Kang JC, Promputtha I
Name from Authors Collection
Scopus Author ID
16319823700
Scopus Author ID
16319823700
Scopus Author ID
16319823700
Affiliations
Mae Fah Luang University; King Saud University; Guizhou Academy of Agricultural Sciences; Goa University; Centre National de la Recherche Scientifique (CNRS); CNRS - Institute of Ecology & Environment (INEE); Museum National d'Histoire Naturelle (MNHN); UDICE-French Research Universities; Sorbonne Universite; Chinese Academy of Sciences; Institute of Microbiology, CAS; Beijing Forestry University; Chinese Academy of Sciences; Institute of Microbiology, CAS; Egyptian Knowledge Bank (EKB); Agricultural Research Center - Egypt; Indonesian Institute of Sciences; University of Mauritius; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC); Field Museum of Natural History (Chicago); Landcare Research - New Zealand; Royal Ontario Museum; University of Toronto; University of Toronto; University of Gothenburg; National Taiwan Ocean University; National Taiwan Ocean University; Universidade Federal de Vicosa; Universidade Nova de Lisboa; Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET); Ahi Evran University; University of Arkansas System; University of Arkansas Fayetteville; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC); University of British Columbia; University of Turin; Egyptian Knowledge Bank (EKB); Sohag University; Guizhou University; Beijing Academy of Agriculture & Forestry; Flinders University South Australia; Chiang Mai University; Yunnan Academy of Agricultural Sciences
Type
Article
Source Title
FUNGAL DIVERSITY
Year
2015
Volume
74
Issue
1
Page
43160
Open Access
Green Published
Publisher
SPRINGER
DOI
10.1007/s13225-015-0351-8
Format
Abstract
Taxonomic names are key links between various databases that store information on different organisms. Several global fungal nomenclural and taxonomic databases (notably Index Fungorum, Species Fungorum and MycoBank) can be sourced to find taxonomic details about fungi, while DNA sequence data can be sourced from NCBI, EBI and UNITE databases. Although the sequence data may be linked to a name, the quality of the metadata is variable and generally there is no corresponding link to images, descriptions or herbarium material. There is generally no way to establish the accuracy of the names in these genomic databases, other than whether the submission is from a reputable source. To tackle this problem, a new database (FacesofFungi), accessible at www.facesoffungi.org (FoF) has been established. This fungal database allows deposition of taxonomic data, phenotypic details and other useful data, which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system. In addition, the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens. This database is user-friendly, providing links and easy access between taxonomic ranks, with the classification system based primarily on molecular data (from the literature and via updated web-based phylogenetic trees), and to a lesser extent on morphological data when molecular data are unavailable. In FoF species are not only linked to the closest phylogenetic representatives, but also relevant data is provided, wherever available, on various applied aspects, such as ecological, industrial, quarantine and chemical uses. The data include the three main fungal groups (Ascomycota, Basidiomycota, Basal fungi) and fungus-like organisms. The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise. The webpage has 76 curators, and with the help of these specialists, FoF will provide an updated natural classification of the fungi, with illustrated accounts of species linked to molecular data. The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups. The structure and use of the database is then explained. We would like to invite all mycologists to contribute to these web pages.
Keyword
Classification | Database | FacesofFungi | Fungi | phylogeny | taxonomy
Industrial Classification
Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Knowledge Taxonomy Level 3
Funding Sponsor
Chinese Academy of Sciences [2013T2S003]; MFLU [56101020032]; ROM; NSERC; Mushroom Research Foundation, Chiang Rai, Thailand
License
Copyright
Rights
School of Science
Publication Source
WOS