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The complete mitochondrial genome of Luffa acutangula
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Metadata
Document Title
The complete mitochondrial genome of Luffa acutangula
Author
Ruang-areerate P., Shearman J., Kongkachana W., Jomchai N., Yoocha T., U-thoomporn S., Narong N., Sheedy J.R., Mekiyanon S., Pootakham W., Tangphatsornruang S.
Name from Authors Collection
Scopus Author ID
12779115900
Scopus Author ID
57201312649
Scopus Author ID
36059124300
Scopus Author ID
57199231749
Scopus Author ID
57219199429
Affiliations
National Omics Center, National Science and Technology Development Agency (NSTDA), Pathumthani, Thailand; Chia Tai Company Limited, Phra Khanong District, Bangkok, Thailand
Type
Article
Source Title
Mitochondrial DNA Part B: Resources
ISSN
23802359
Year
2020
Volume
5
Issue
3
Page
3208-3209
Open Access
All Open Access, Bronze
Publisher
Taylor and Francis Ltd.
DOI
10.1080/23802359.2020.1810165
Format
Abstract
Based on PacBio de novo assembly, we report the first complete mitochondrial genome of Luffa acutangula (460,333 bp) containing nine large chloroplast-derived sequences (1.9–17.3 kb) across the mitogenome. The base composition of the mitogenome in descending order is A: 28.02%, C: 22.04%, G: 21.83% and T: 28.10%, and the G + C content is 43.87%. There are 63 mitochondrial genes including 40 protein-coding genes, 3 rRNA genes and 20 tRNA genes. Additionally, a total of 288 repeats ranging from 31 to 5,301 bp were identified, accounting for 5.7% of the mitogenome. Two large direct repeats (5,301 and 405 bp) within the mitogenome were found for the formation of four subgenomic molecules. A phylogenetic analysis showed that L. acutangula was closely related to other species in Cucurbiaceae. This mitogenome provides useful genetic information for evolutionary studies. © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
Industrial Classification
Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Knowledge Taxonomy Level 3
Funding Sponsor
National Science and Technology Development Agency
Funding Number
1000221
License
N/A
Rights
N/A
Publication Source
Scopus