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Rapid and visual Chlamydia trachomatis detection using loop-mediated isothermal amplification and hydroxynaphthol blue
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Metadata
Document Title
Rapid and visual Chlamydia trachomatis detection using loop-mediated isothermal amplification and hydroxynaphthol blue
Author
Choopara I, Arunrut N, Kiatpathomchai W, Dean D, Somboonna N
Name from Authors Collection
Affiliations
Chulalongkorn University; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC); University of California System; University of California San Francisco; UCSF Medical Center; UCSF Benioff Children's Hospital Oakland; University of California System; University of California San Francisco; University of California System; University of California Berkeley; Chulalongkorn University; Chulalongkorn University
Type
Article
Source Title
LETTERS IN APPLIED MICROBIOLOGY
Year
2017
Volume
64
Issue
1
Page
51-56
Open Access
Green Submitted
Publisher
WILEY
DOI
10.1111/lam.12675
Format
Abstract
We developed an assay comprising crude DNA lysis by simple heat treatment coupled loop-mediated isothermal amplification with hydroxynaphthol blue for Chlamydia trachomatis detection (petty patent pending), and evaluated the developed assay for its feasibility as a one-step point-of-care detection on 284 endocervical swab specimens from clinically symptomatic C.trachomatis and healthy subjects. This assay is sensitive to 004pg of ompA, specific with six primers targeting C.trachomatis ompA region, rapid (45min total assay time), inexpensive (approx. 3USD/reaction), does not require sophisticated instrumentation, and has comparable assay effectiveness (95% specificity, 90-100% sensitivity) to bacterial DNA isolation by a commercial kit coupled with polymerase chain reaction and gel electrophoresis (98-100% specificity, 87-100% sensitivity) based on the clinical samples test. The test result could be read by naked eye through the colour change from violet (negative) to sky blue (positive) for C.trachomatis-infected specimens. Further, this assay uses all safe chemical reagents and is hence safe to the users.
Industrial Classification
Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Knowledge Taxonomy Level 3
Funding Sponsor
Ratchadaphiseksomphot Endowment Fund of Chulalongkorn University [CU-56-466-HR]
License
Copyright
Rights
Publisher
Publication Source
WOS