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New nematicidal and antimicrobial secondary metabolites from a new species in the new genus, Pseudobambusicola thailandica
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Metadata
Document Title
New nematicidal and antimicrobial secondary metabolites from a new species in the new genus, Pseudobambusicola thailandica
Author
Rupcic Z, Chepkirui C, Hernandez-Restrepo M, Crous PW, Luangsa-ard JJ, Stadler M
Name from Authors Collection
Affiliations
Helmholtz Association; Helmholtz-Center for Infection Research; German Center for Infection Research; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC)
Type
Article
Source Title
MYCOKEYS
Year
2018
Issue
33
Page
44927
Open Access
Green Published, Green Submitted, gold
Publisher
PENSOFT PUBLISHERS
DOI
10.3897/mycokeys.33.23341
Format
Abstract
During the course of a study on the functional biodiversity of the mycobiota inhabiting rainforests in Thailand, a fungal strain was isolated from a plant sample and shown to represent an undescribed species, as inferred from a combination of morphological and molecular phylogenetic methods. Molecular phylogenetic analyses, based on four DNA loci, revealed a phylogenetic tree with the newly generated sequences clustering in a separate branch, together with members of the Sulcatisporaceae (Pleosporales, Ascomycota). The Thai specimen morphologically resembled Neobambusicola strelitziae in having pycnidial conidiomata with phialidic conidiogenous cells that produce both fusoid-ellipsoid macroconidia and subcylindrical microconidia. However, the new fungus, for which the name Pseudobambusicola thailandica is proposed, differs from N. strelitziae in having conidiomata with well-defined necks, the presence of globose to subglobose thick-walled cells adjacent to conidiomata and the production of chlamydospores in culture. When cultures of P. thailandica, growing on water agar, were confronted with Caenorhabditis elegans nematodes, worms approaching the fungal mycelia were killed. This observation gave rise to a study of its secondary metabolites and six novel and two known compounds were isolated from submerged cultures of P. thailandica. The structures of metabolites 1-6, for which the trivial names thailanones A-F are proposed, were elucidated using a combination of spectral methods, including extensive 1 and 2D NMR analysis and high resolution mass spectrometry. Compounds 4 and 8 showed strong nematicidal and weak antifungal activity, whereas all other tested compounds showed moderate to weak nematicidal activity but no significant effects in the serial dilution assay against various fungi and bacteria. Compounds 1 and 8 also inhibited growth of the pathogenic basidiomycete Phellinus tremulae in a plate diffusion assay.
Keyword
Antifungal agent | deoxyphomalone | monocerin | nematicide | nematode-antagonism | phylogeny
Industrial Classification
Knowledge Taxonomy Level 3
Funding Sponsor
European Union's Horizon research and innovation programme (RISE) under the Marie Sklodowska-Curie grant [645701]; German Academic Exchange Service (DAAD); Kenya National Council for Science and Technology (NACOSTI)
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Copyright
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Publisher
Publication Source
WOS