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Kutzneria chonburiensis sp nov., isolated from soil
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Metadata
Document Title
Kutzneria chonburiensis sp nov., isolated from soil
Author
Chanama M, Thongkrachang N, Suriyachadkun C, Chanama S
Name from Authors Collection
Affiliations
Mahidol University; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC); Chulalongkorn University
Type
Article
Source Title
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
ISSN
1466-5026
Year
2015
Volume
65
Page
4169-4174
Open Access
Bronze
Publisher
MICROBIOLOGY SOC
DOI
10.1099/ijsem.0.000552
Format
Abstract
A novel actinomycete strain, SMC 256(T), which developed small, globose sporangia at the ends of long sporangiophores on aerial mycelium, was isolated from soil collected in a mountain forest of Thailand. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain SMC 256(T) belonged to the genus Kutzneria, and the closest phylogenetically related species were Kutzneria buriramensis BCC 29373(T) (98.9 % 16S rRNA gene sequence similarity), Kutzneria kofuensis ATCC 27102(T) (98.2 %), Kutzneria albida ATCC 25243(T) (97.9 %) and Kutzneria viridogrisea ATCC 25242(T) (97.4 %). The DNA-DNA relatedness values that distinguished strain SMC 256(T) from previously described members of the genus Kutzneria were significantly below 70 %. The G+C content of the genomic DNA was 71.8 mol%. The cell-wall peptidoglycan contained meso-diaminopimelic acid. The whole-cell sugars consisted of rhamnose, ribose, mannose, glucose and galactose. The predominant menaquinone was MK-9(H-4). Mycolic acids were not detected. The diagnostic phospholipids were hydroxyphosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannosides, unidentified phosphoglycolipids, unidentified phospholipids and an unidentified lipid. The predominant cellular fatty acids were iso-C-16 : 0, C-17 : 1 and C-17 : 0 10-methyl. Following the evidence of phenotypic, chemotaxonomic and genotypic studies, it is proposed that strain SMC 256(T) represents a novel species in the genus Kutzneria, namely Kutzneria chonburiensis sp. nov. The type strain is SMC 256(T) (=BCC 72675(T) =NBRC 110610(T)).
Industrial Classification
Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Funding Sponsor
Mahidol University; China Medical Board (CMB), Faculty of Public Health, Mahidol University, Bangkok, Thailand
Publication Source
WOS