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Distinct biochemical properties of human serine hydroxymethyltransferase compared with the Plasmodium enzyme: implications for selective inhibition
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Document Title
Distinct biochemical properties of human serine hydroxymethyltransferase compared with the Plasmodium enzyme: implications for selective inhibition
Author
Pinthong C, Maenpuen S, Amornwatcharapong W, Yuthavong Y, Leartsakulpanich U, Chaiyen P
Name from Authors Collection
Affiliations
Mahidol University; Mahidol University; Burapha University; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC)
Type
Article
Source Title
FEBS JOURNAL
ISSN
1742-464X
Year
2014
Volume
281
Issue
11
Page
2570-2583
Open Access
Bronze
Publisher
WILEY
DOI
10.1111/febs.12803
Format
Abstract
Serine hydroxymethyltransferase (SHMT) catalyzes the transfer of a hydroxymethyl group from l-serine to tetrahydrofolate to yield glycine and 5,10-methylenetetrahydrofolate. Our previous investigations have shown that SHMTs from Plasmodium spp. (P.falciparum, Pf; P.vivax, Pv) are different from the enzyme from rabbit liver in that PlasmodiumSHMT can use d-serine as a substrate. In this report, the biochemical and biophysical properties of the Plasmodium and the human cytosolic form (hcSHMT) enzymes including ligand binding and kinetics were investigated. The data indicate that, similar to Plasmodium enzymes, hcSHMT can use d-serine as a substrate. However, hcSHMT displays many properties that are different from those of the Plasmodium enzymes. The molar absorption coefficient of hcSHMT-bound pyridoxal-5-phosphate (PLP) is much greater than PvSHMT-bound or PfSHMT-bound PLP. The binding interactions of hcSHMT and PlasmodiumSHMT with d-serine are different, as only the Plasmodium enzyme undergoes formation of a quinonoid-like species upon binding to d-serine. Furthermore, it has been noted that hcSHMT displays strong substrate inhibition by tetrahydrofolate (THF) (at THF >40m), compared with SHMTs from Plasmodium and other species. The pH-activity profile of hcSHMT shows higher activities at lower pH values corresponding to a pKa value of 7.8 +/- 0.1. Thiosemicarbazide reacts with hcSHMT following a one-step model [k1 of 12 +/- 0.6m-1 center dot s-1 and k-1 of (1.0 +/- 0.6)x10-3s-1], while the same reaction with PfSHMT involves at least three steps. All data indicated that the ligand binding environment of SHMT from human and Plasmodium are different, indicating that it should be possible to develop species-selective inhibitors in future studies. Database serine hydroxymethyltransferase, EC 2.1.2.1; 5,10-methylenetetrahydrofolate dehydrogenase, EC 1.5.1.5
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Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Funding Sponsor
Cluster Program and Management Office, National Science and Technology Development Agency [BT-B-02-MG-BC-5006/CPMO-P-00-20029, CPMO-P-13-00835]; Cluster Program and Management Office for Discovery based Development Grants [CPMO-DD/P-10-11274]; Thailand Research Fund [RTA5680001, MRG5580066]; Faculty of Science, Mahidol University; Thailand Graduate Institute of Science and Technology (TGIST); Faculty of Science, Burapha University
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