{"id":5454,"date":"2023-12-22T15:04:37","date_gmt":"2023-12-22T08:04:37","guid":{"rendered":"https:\/\/www.nstda.or.th\/noc\/?p=5454"},"modified":"2023-12-22T15:18:53","modified_gmt":"2023-12-22T08:18:53","slug":"genome-luffa-cylindrica","status":"publish","type":"post","link":"https:\/\/www.nstda.or.th\/noc\/research-outputs\/genome-luffa-cylindrica\/","title":{"rendered":"Genome Luffa cylindrica"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"5454\" class=\"elementor elementor-5454\" data-elementor-post-type=\"post\">\n\t\t\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-c22f63f elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"c22f63f\" data-element_type=\"section\" data-e-type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-50 elementor-top-column elementor-element elementor-element-2fe9076\" data-id=\"2fe9076\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-71f845e elementor-widget elementor-widget-text-editor\" data-id=\"71f845e\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<h1 class=\"elementor-heading-title elementor-size-default\"><em>Luffa cylindrica<\/em><\/h1>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-58aea8b elementor-widget elementor-widget-text-editor\" data-id=\"58aea8b\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><span class=\"elementor-icon-list-text elementor-post-info__item elementor-post-info__item--type-terms\"><span class=\"elementor-post-info__terms-list\"><a class=\"elementor-post-info__terms-list-item\" href=\"https:\/\/www.nstda.or.th\/noc\/category\/research-outputs\/genome-assemblies\/\">Genome assemblies<\/a><\/span><\/span><span class=\"elementor-icon-list-text elementor-post-info__item elementor-post-info__item--type-date\"><span class=\"elementor-post-info__item-prefix\">\u00a0 Post Date :<\/span> 22\/12\/2023<\/span><\/p>\n<p>PacBio assembly:\u00a0BioProject\u00a0<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/bioproject\/?term=PRJNA614596\" target=\"_blank\" rel=\"noopener noreferrer\">PRJNA614596<\/a><\/p>\n<p>Genome\u00a0sequence:\u00a0<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/search\/all\/?term=JAAVXE000000000\" target=\"_blank\" rel=\"noopener noreferrer\">JAAVXE000000000<\/a><\/p>\n<p>Annotation:\u00a0<a href=\"https:\/\/waa.inter.nstda.or.th\/stks\/pub\/noc\/GenomeData\/Luffa_circular.gff3\" target=\"_blank\" rel=\"noopener noreferrer\">gff3<\/a>\u00a0<a href=\"https:\/\/waa.inter.nstda.or.th\/stks\/pub\/noc\/GenomeData\/Luffa_circular_CDS.fasta\" target=\"_blank\" rel=\"noopener noreferrer\">CDS<\/a>\u00a0<a href=\"https:\/\/waa.inter.nstda.or.th\/stks\/pub\/noc\/GenomeData\/Luffa_cylindriluffa_circular_protein.fasta\" target=\"_blank\" rel=\"noopener noreferrer\">protein<\/a><\/p>\n<p>Publication:\u00a0<a href=\"https:\/\/www.nstda.or.th\/noc\/images\/GenomeData\/luffa_acu\/2021_De_novo_assemblies_of_Luffa_acutangula_and_Luffa_cylindrica_genomes_reveal_an_expansion_associated_with_substantial_accumulation_of_transpo.pdf\" target=\"_blank\" rel=\"noopener noreferrer\"><em>De novo<\/em>\u00a0assemblies of\u00a0<em>Luffa acutangula<\/em>\u00a0and\u00a0<em>Luffa cylindrica<\/em>\u00a0genomes reveal an expansion<\/a><a href=\"https:\/\/www.nstda.or.th\/noc\/images\/GenomeData\/luffa_acu\/2021_De_novo_assemblies_of_Luffa_acutangula_and_Luffa_cylindrica_genomes_reveal_an_expansion_associated_with_substantial_accumulation_of_transpo.pdf\" target=\"_blank\" rel=\"noopener noreferrer\">\u00a0associated with substantial accumulation of transposable elements<\/a><\/p>\n<p><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1111\/1755-0998.13240\" target=\"_blank\" rel=\"noopener\">DOI: 10.1111\/1755-0998.13240<\/a><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t<div class=\"elementor-column elementor-col-50 elementor-top-column elementor-element elementor-element-79311d0\" data-id=\"79311d0\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-bbbe307 elementor-widget elementor-widget-image\" data-id=\"bbbe307\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img fetchpriority=\"high\" decoding=\"async\" width=\"500\" height=\"333\" src=\"https:\/\/www.nstda.or.th\/noc\/wp-content\/uploads\/2022\/10\/Luffa-cylindrica.jpg\" class=\"attachment-large size-large wp-image-3180\" alt=\"\" srcset=\"https:\/\/www.nstda.or.th\/noc\/wp-content\/uploads\/2022\/10\/Luffa-cylindrica.jpg 500w, https:\/\/www.nstda.or.th\/noc\/wp-content\/uploads\/2022\/10\/Luffa-cylindrica-300x200.jpg 300w\" sizes=\"(max-width: 500px) 100vw, 500px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-caa55e5 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"caa55e5\" data-element_type=\"section\" data-e-type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-c9d63f0\" data-id=\"c9d63f0\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-7dff6dd elementor-align-center elementor-widget elementor-widget-button\" data-id=\"7dff6dd\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"button.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-button-wrapper\">\n\t\t\t\t\t<a class=\"elementor-button elementor-button-link elementor-size-sm\" href=\"https:\/\/www.nstda.or.th\/noc\/research-outputs\/genome-assemblies\/\">\n\t\t\t\t\t\t<span class=\"elementor-button-content-wrapper\">\n\t\t\t\t\t\t\t\t\t<span class=\"elementor-button-text\">Genome assemblies<\/span>\n\t\t\t\t\t<\/span>\n\t\t\t\t\t<\/a>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-700fbd0 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"700fbd0\" data-element_type=\"section\" data-e-type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-1739eba\" data-id=\"1739eba\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap\">\n\t\t\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>Luffa cylindrica Genome assemblies\u00a0 Post Date : 22\/12\/2023 PacBio assembly:\u00a0BioProject\u00a0PRJNA614596 Genome\u00a0sequence:\u00a0JAAVXE000000000 Annotation:\u00a0gff3\u00a0CDS\u00a0protein Publication:\u00a0De novo\u00a0assemblies of\u00a0Luffa acutangula\u00a0and\u00a0Luffa cylindrica\u00a0genomes reveal an expansion\u00a0associated with substantial accumulation of transposable elements DOI: 10.1111\/1755-0998.13240 Genome assemblies<\/p>\n","protected":false},"author":6,"featured_media":2518,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_wp_rev_ctl_limit":""},"categories":[212],"tags":[],"class_list":["post-5454","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-research-outputs"],"blocksy_meta":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.2 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Genome Luffa cylindrica - National Omics Center<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.nstda.or.th\/noc\/research-outputs\/genome-luffa-cylindrica\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Genome Luffa cylindrica - 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