{"id":4710,"date":"2023-09-26T13:37:38","date_gmt":"2023-09-26T06:37:38","guid":{"rendered":"https:\/\/www.nstda.or.th\/noc\/?p=4710"},"modified":"2023-10-05T16:01:05","modified_gmt":"2023-10-05T09:01:05","slug":"genome-centella-asiatica","status":"publish","type":"post","link":"https:\/\/www.nstda.or.th\/noc\/research-outputs\/genome-centella-asiatica\/","title":{"rendered":"Genome -Centella asiatica"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"4710\" class=\"elementor elementor-4710\" data-elementor-post-type=\"post\">\n\t\t\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-4d687f6 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"4d687f6\" data-element_type=\"section\" data-e-type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-50 elementor-top-column elementor-element elementor-element-0bf2dfb\" data-id=\"0bf2dfb\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-a07b377 elementor-widget elementor-widget-heading\" data-id=\"a07b377\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\"><i>Centella asiatica<\/i><\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-3bb4027 elementor-widget elementor-widget-text-editor\" data-id=\"3bb4027\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><span class=\"elementor-icon-list-text elementor-post-info__item elementor-post-info__item--type-terms\"><span class=\"elementor-post-info__terms-list\"><a class=\"elementor-post-info__terms-list-item\" href=\"https:\/\/www.nstda.or.th\/noc\/category\/research-outputs\/genome-assemblies\/\">Genome assemblies<\/a><\/span><\/span><span class=\"elementor-icon-list-text elementor-post-info__item elementor-post-info__item--type-date\"><span class=\"elementor-post-info__item-prefix\">\u00a0 Post Date :<\/span>\u00a018\/10\/2022<\/span><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-927bc68 elementor-widget elementor-widget-text-editor\" data-id=\"927bc68\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><strong>Local name:<\/strong> \u0e1a\u0e31\u0e27\u0e1a\u0e01<\/p>\n<p><strong>Sample collection:<\/strong> Department of Agriculture, Thailand<\/p>\n<p><strong>Method:<\/strong> 10x assembly + HiC assembly<\/p>\n<p><strong>Assembly level:<\/strong> Chromosome<\/p>\n<p><strong>BioProject:<\/strong> <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/bioproject\/?term=PRJNA642665\" target=\"_blank\" rel=\"noopener\">PRJNA642665<\/a><\/p>\n<p><strong>Genome sequence:<\/strong> <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/genome\/?term=Centella+asiatica\" target=\"_blank\" rel=\"noopener\">JACAVP000000000<\/a><\/p>\n<p><strong>Annotation Data (Download):<\/strong> <a href=\"https:\/\/waa.inter.nstda.or.th\/stks\/pub\/noc\/GenomeData\/centella.gff3\" target=\"_blank\" rel=\"noopener\">gff3<\/a>,\u00a0<a href=\"https:\/\/waa.inter.nstda.or.th\/stks\/pub\/noc\/GenomeData\/centella_CDS.fasta\" target=\"_blank\" rel=\"noopener\">CDS<\/a>,\u00a0<a href=\"https:\/\/waa.inter.nstda.or.th\/stks\/pub\/noc\/GenomeData\/centella_protein.fasta\" target=\"_blank\" rel=\"noopener\">protein<\/a><\/p>\n<p><strong>Publication:<\/strong> <a href=\"https:\/\/doi.org\/10.1016\/j.ygeno.2021.05.019\"><em>De novo<\/em> chromosome-level assembly of the <em>Centella asiatica<\/em> genome<\/a><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t<div class=\"elementor-column elementor-col-50 elementor-top-column elementor-element elementor-element-ae906c6\" data-id=\"ae906c6\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-b5c42f2 elementor-arrows-position-inside elementor-pagination-position-outside elementor-widget elementor-widget-image-carousel\" data-id=\"b5c42f2\" data-element_type=\"widget\" data-e-type=\"widget\" data-settings=\"{&quot;slides_to_show&quot;:&quot;1&quot;,&quot;navigation&quot;:&quot;both&quot;,&quot;autoplay&quot;:&quot;yes&quot;,&quot;pause_on_hover&quot;:&quot;yes&quot;,&quot;pause_on_interaction&quot;:&quot;yes&quot;,&quot;autoplay_speed&quot;:5000,&quot;infinite&quot;:&quot;yes&quot;,&quot;effect&quot;:&quot;slide&quot;,&quot;speed&quot;:500}\" data-widget_type=\"image-carousel.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-image-carousel-wrapper swiper\" role=\"region\" aria-roledescription=\"carousel\" aria-label=\"Image Carousel\" dir=\"ltr\">\n\t\t\t<div class=\"elementor-image-carousel swiper-wrapper\" aria-live=\"off\">\n\t\t\t\t\t\t\t\t<div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"1 of 3\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.nstda.or.th\/noc\/wp-content\/uploads\/2023\/09\/Centella-asiatica_04.jpg\" alt=\"Centella asiatica_04\" \/><\/figure><\/div><div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"2 of 3\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.nstda.or.th\/noc\/wp-content\/uploads\/2023\/09\/Centella_asiatica_circos.png\" alt=\"Centella_asiatica_circos\" \/><\/figure><\/div><div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"3 of 3\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.nstda.or.th\/noc\/wp-content\/uploads\/2023\/09\/Centella_asiatica_hiC.png\" alt=\"Centella_asiatica_hiC\" \/><\/figure><\/div>\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t\t<div class=\"elementor-swiper-button elementor-swiper-button-prev\" role=\"button\" tabindex=\"0\">\n\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"eicon-chevron-left\"><\/i>\t\t\t\t\t<\/div>\n\t\t\t\t\t<div class=\"elementor-swiper-button elementor-swiper-button-next\" role=\"button\" tabindex=\"0\">\n\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"eicon-chevron-right\"><\/i>\t\t\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<div class=\"swiper-pagination\"><\/div>\n\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-512d333 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"512d333\" data-element_type=\"section\" data-e-type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-ebe09c0\" data-id=\"ebe09c0\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-9bddb2c elementor-align-center elementor-widget elementor-widget-button\" data-id=\"9bddb2c\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"button.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-button-wrapper\">\n\t\t\t\t\t<a class=\"elementor-button elementor-button-link elementor-size-sm\" href=\"https:\/\/www.nstda.or.th\/noc\/research-outputs\/genome-assemblies\/\">\n\t\t\t\t\t\t<span class=\"elementor-button-content-wrapper\">\n\t\t\t\t\t\t\t\t\t<span class=\"elementor-button-text\">Genome assemblies<\/span>\n\t\t\t\t\t<\/span>\n\t\t\t\t\t<\/a>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>Centella asiatica Genome assemblies\u00a0 Post Date :\u00a018\/10\/2022 Local name: \u0e1a\u0e31\u0e27\u0e1a\u0e01 Sample collection: Department of Agriculture, Thailand Method: 10x assembly + HiC assembly Assembly level: Chromosome BioProject: PRJNA642665 Genome sequence: JACAVP000000000 Annotation Data (Download): gff3,\u00a0CDS,\u00a0protein Publication: De novo chromosome-level assembly of the Centella asiatica genome Genome assemblies<\/p>\n","protected":false},"author":5,"featured_media":2518,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_wp_rev_ctl_limit":""},"categories":[212],"tags":[],"class_list":["post-4710","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-research-outputs"],"blocksy_meta":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.2 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Genome -Centella asiatica - National Omics Center<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, 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