Our recent publications

 Metabolomics:

  • Pornkanok Pongpamorn, Cholpisit Kiattisewee, Narongyot Kittipanukul, Juthamas Jaroensuk, Duangthip Trisrivirat, Somchart Maenpuen, and Pimchai Chaiyen (2021) Carboxylic Acid Reductase Can Catalyze Ester Synthesis in Aqueous Environments. Angewandte Chemie 133: 5813-7
  • Dewi Ratih Tirto Sari, Atchara Paemanee, Sittiruk Roytrakul, James Robert Ketudat Cairns, Anna Safitri, Fatchiyah Fatchiyah (2021) Black rice cultivar from Java Island of Indonesia revealed genomic, proteomic and anthocyanin nutritional value. Acta Bioichimica Polonica org/10.18388/abp.2020_5386
  • Feng Li, Wipaporn Khanom, Xia Sun, Atchara PaemaneeSittiruk Roytrakul, Decai Wang, Duncan R Smith, Guo-Chun Zhou (2020) Andrographolide and Its 14-Aryloxy analogues inhibit zika and dengue virus infection. Molecules 25(21): 5037 Jeerang Wongtrakul, Atchara Paemanee, Phitchayapak Wintachai, Chutima Thepparit, Sittiruk Roytrakul, Thananya Thongtan, Kanokwan Janphen, Khuanchai Supparatpinyo, Duncan R Smith (2019) Nevirapine induces apoptosis in liver (HepG2) cells. Asian Pacific Journal of Tropical Medicine 9(6): 531-536
  • Aussara Panya, Petlada Yongpitakwattana, Prapaphan Budchart, Nunghathai Sawasdee, Sucheewin Krobthong, Atchara Paemanee, Sittiruk Roytrakul, Siriluk Rattanabunyong, Kiattawee Choowongkomon, Pa‐thai Yenchitsomanus (2019) Novel bioactive peptides demonstrating anti-dengue virus activity isolated from the Asian medicinal plant Acacia catechu. Chemical Biology and Drug Design 93(2) :100-109
  • Atchara Paemanee, Atitaya Hitakarun, Sittiruk Roytrakul, Duncan R Smith (2018) Screening of melatonin, a-tocopherol, folic acid, acetyl-L-carnitine and resveratrol for anti-dengue 2 virus activity. BMC Research Notes 11(1): 1-7
  • Aphisit Poonsrisawat, Atchara Paemanee, Sittichoke Wanlapatit, Kuakoon Piyachomkwan, Lily Eurwilaichitr, Verawat Champreda (2017) Simultaneous saccharification and viscosity reduction of cassava pulp using a multi-component starch and cell-wall degrading enzyme for bioethanol production. 3Biotech 7(5): 1-10
  • Atchara Paemanee, Wannapa Sornjai, Suthathip Kittisenachai, Naraporn Sirinonthanawech, Sittiruk Roytrakul, Jeerang Wongtrakul, Duncan R Smith (2017) Nevirapine induced mitochondrial dysfunction in HepG2 cells. Scientific Reports 7(1); 1-11
  • Aphisit Poonsrisawat, Sittichoke Wanlapatit, Rungtiva Wansuksri, Kuakoon Piyachomkwan, Atchara Paemanee, Chaiwut Gamonpilas, Lily Eurwilaichitr, Verawat Champreda (2017) Synergistic effects of cell wall degrading enzymes on rheology of cassava root mash. Process Biochemistry 51(12): 2104-2111 

Proteomics

  • Rungroj Saruengkhanphasit, Chutikarn Butkinaree, Narittira Ornnork, Kriengsak Lirdprapamongkol, Worawat Niwetmarin, Jisnuson Svasti, Somsak Ruchirawat, Chatchakorn Eurtivong (2021) Identification of new 3-phenyl-1H-indole-2-carbohydrazide derivatives and their structure-activity relationships as potent tubulin inhibitors and anticancer agents: A combined in silico, in vitro and synthetic study. Bioorganic Chemistry 110, 104795
  • Benjawan Kaewseekhao, Sittiruk Roytrakul, Yodying Yingchutrakul, Kanin Salao, Wipa Reechaipichitkul, Kiatichai Faksri (2020) Proteomic analysis of infected primary human leucocytes revealed PSTK as potential treatment-monitoring marker for active and latent tuberculosis. PLoS One 15(4): e0231834
  • Rui Li, Trilert Chaicherdsakul, Viyada Kunathigan, Sittiruk Roytrakul, Atchara Paemanee, Suthathip Kittisenachai (2020) Shotgun Proteomic Analysis of Germinated Rice (Oryza sativa L.) under Salt Stress. Applied Science and Engineering Progress 13(1): 76-85
  • Sucheewin Krobthong, Yodying Yingchutrakul (2020) Identification and enhancement of antioxidant P1-peptide isolated from Ganoderma lucidumhydrolysate. Food Biotechnology 34: 338-351
  • Aroonothai Sawwa, Yodying Yingchutrakul, Sittiruk Roytrakul, Wanwisa Siriwan and Srimek Chowpongpang (2020) Identification of GST Interacted Proteins under PRSV Infected Papaya Using Affinity Purification–mass Spectrometry. Applied Science and Engineering Progress 13(3): 224-232
  • Pramote Sriwanitchrak, Atchara Paemanee, Sittiruk Roytrakul, Vithoon Viyanant, Kesara NaBangchang (2019) Glycoproteomics analysis of plasma proteins associated with Opisthorchis viverrini infection-induced cholangiocarcinoma in hamster model. Asian Pacific Journal of Tropical Medicine 9(12): 1142-7
  • Chattip SuphatpahirapolThu-Ha NguyenYada Tansiri, Yodying Yingchutrakul, Sittiruk Roytrakul, Supachai Nitipan, Worawidh Wajjwalku, Dietmar Haltrich, Siriwan Prapong, Suttipun Keawsompong (2019) Expression of a leptospiral leucine-rich repeat protein using a food-grade vector in Lactobacillus plantarum, as a strategy for vaccine delivery. 3 Biotech 9:324
  • Sirikan Maneesuwannarat, Kanjana Kudpeng, Yodying Yingchutrakul, Sittiruk Roytrakul, Alisa Vangnai, Mitsuo Yamashita  Paitip Thiravetyan (2019)  A possible protein model involved in gallium arsenide leaching by Cellulosimicrobium funkei.  Minerals Engineering 137: 207-216
  • Parichart TesenaYodying YingchutrakulSittiruk Roytrakul, , Kris Angkanaporn (2019) Serum protein expression in Equine Glandular Gastric Disease (EGGD) induced by phenylbutazone. Journal of Veterinary Medical Science 81: 418-24
  • Krissana Boonpa, Supaluk Tantong, Kamonwan Weerawanich, Pawinee Panpetch, Onanong Pringsulaka, Yodying Yingchutrakul, Sittiruk Roytrakul, Supaart Sirikantarama (2018) Heterologous expression and antimicrobial activity of OsGASR3 from rice (Oryza sativa L.). Journal of Plant Physiology 224-225: 95-102
  • Thanyapat Jarupalee, Pantipa Chatchatee, Kittinan Komolpis, Narissara Suratannon, Sittiruk Roytrakul, Yodying Yingchutrakul, Wanaporn Yimchuen, Patcharavadee Butta, Alain Jacquet, Tanapat Palaga (2018) Detecting Allergens from Black Tiger Shrimp Penaeus monodon That Can Bind and Cross-link IgE by ELISA, Western Blot, and a Humanized Rat Basophilic Leukemia Reporter Cell Line RS-ATL8 Allergy Asthma Immunol Res. 10(1):62-76
  • Suvichark Aroonluk, Sittiruk Roytrakul, Yodying Yingchutrakul, Suthathip Kittisenachai, Chatchawan Jantasuriyarat (2018) Identification and characterization of glycoproteins during oil palm somatic embryogenesis.  Agriculture and Natural Resources 52:430-438
  • Kanaporn Poltep, Parichart Tesena, Yodying Yingchutrakul, Jane Taylor, Tuempong Wongtawan (2018) Optimisation of a serum albumin removal protocol for use in a proteomic study to identify the protein biomarkers for silent gastric ulceration in horses. Journal of Equine Science 29: 53-60
  • Thamonwan Diteepeng, Sarawut Khongwichit, Atchara Paemanee, Sittiruk Roytrakul, Duncan R Smith (2019) Proteomic analysis of monkey kidney LLC-MK2 cells infected with a Thai strain Zika virus. Archives of Virology 164(3): 725-737
  • Atchara Paemanee, Atitaya Hitakarun, Phitchayapak Wintachai, Sittiruk Roytrakul, Duncan R Smith (2019) A proteomic analysis of the anti-dengue virus activity of andrographolide. Biomedicine and Pharmacotherapy 109; 322-332
  • Churat Weeraphan, Amornrat Phongdara, Parunya Chaiyawat, Penchatr Diskul-Na-Ayudthaya, Daranee Chokchaichamnankit, Chris VerathamjamrasPukkavadee NetsirisawanYodying YingchutrakulSittiruk RoytrakulVoraratt ChampattanachaiJisnuson SvastiChantragan Srisomsap(2019) Phosphoproteome Profiling of Isogenic Cancer Cell-Derived Exosome Reveals HSP90 as a Potential Marker for Human Cholangiocarcinoma. Proteomics 19(12) : e1800159
  • Challika Kaewborisuth, Yodying Yingchutrakul, Sittirtuk Roytrakul and Anan Jongkaewwattana (2019) Porcine Epidemic Diarrhea Virus (PEDV) ORF3 Interactome Reveals Inhibition of Virus Replication by Cellular VPS36 Protein. Viruses 11(4): 382
  • Pattama Mutthi, Sirin Theerawatanasirikul, Sittiruk Roytrakul, Atchara Paemanee, Chalermpol Lekcharoensuk, Payuda Hansoongnern, Nantawan Petcharat, Nattarat Thangthamniyom, Porntippa Lekcharoensuk (2018) Interferon gamma induces cellular protein alteration and increases replication of porcine circovirus type 2 in PK-15 cells. Archives of Virology 163(11): 2947-57
  • Gumpanat Mahipant, Atchara Paemanee, Sittiruk Roytrakul, Junichi Kato, Alisa S Vangnai (2017) The significance of proline and glutamate on butanol chaotropic stress in Bacillus subtilis 168. Biotechnology for Biofuels 10(1): 1-14
  • Sayamon Sithtisarn, Kittisak Yokthongwattana, Bancha Mahong, Sittiruk Roytrakul, Atchara Paemanee, Narumon Phaonakrop, Chotika Yokthongwattana (2017) Comparative proteomic analysis of Chamydomonas reinhardtii control and a salinity-tolerant strain revealed a differential protein expression pattern. Planta 246(5); 843-856

 Transcriptomics

  • Kim Fooyontphanich, Fabienne Morcillo, Thierry Joët, Stéphane Dussert, Julien Serret, Myriam Collin, Philippe Amblard, Sithichoke Tangphatsornruang, Peerapat Roongsattham, Chatchawan Jantasuriyarat, Jean-Luc Verdeil, Timothy J. Tranbarger (2021) Multi-scale comparative transcriptome analysis reveals key genes and metabolic reprogramming processes associated with oil palm fruit abscission. BMC Plant Biology, 21(1): 1-1
  • Wuttichai Mhuantong, Salisa Charoensri, Aphisit Poonsrisawat, Wirulda Pootakham, Sithichoke Tangphatsornruang, Chatuphon Siamphan, Surisa Suwannarangsee, Lily Eurwilaichitr, Verawat Champreda, Varodom Charoensawan, Duriya Chantasingh (2021) High Quality Aspergillus aculeatus Genomes and Transcriptomes: a Platform for Cellulase Activity Optimization towards Industrial Applications. Frontiers in Bioengineering and Biotechnology, 8: 607176
  • Kanchana Sittikankaew, Wirulda Pootakham, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Jutatip Khudet, Intawat Nookeaw, Umaporn Uawisetwathana, Wanilada Rungrassamee, Nitsara Karoonuthaisiri (2020) Transcriptome analyses reveal the synergistic effects of feeding and eyestalk ablation on ovarian maturation in black tiger shrimp. Scientific Reports 10; 1-13
  • Wirulda Pootakham, Tanaporn Uengwetwanit, Chutima Sonthirod, Kanchana Sittikankaew, Nitsara Karoonuthaisiri (2020) A Novel Full-Length Transcriptome Resource for Black Tiger Shrimp (Penaeus monodon) Developed Using Isoform Sequencing (Iso-Seq) Frontier in Marine Science 7: 10-12
  • Wanapinun Nawae, Chutintorn Yundaeng, Chaiwat Naktang, Wasitthee Kongkachana, Thippawan Yoocha, Chutima Sonthirod, Nattapol Narong, Prakit Somta, Kularb Laosatit, Sithichoke Tangphatsornruang and Wirulda Pootakham (2020) The Genome and Transcriptome Analysis of the Vigna mungo Chloroplast. Plants 9(9): 1247
  • Wanapinun Nawae, Jeremy R. Shearman, Sithichoke Tangphatsornruang, Prapat Punpee, Thippawan Yoocha, Duangjai Sangsrakru, Chaiwat Naktang, Chutima Sonthirod, Warodom Wirojsirasak, Kittipat Ukoskit , Klanarong Sriroth , Peeraya Klomsa-ard and Wirulda Pootakham (2020) Differential expression between drought-tolerant and drought-sensitive sugarcane under mild and moderate water stress as revealed by a comparative analysis of leaf transcriptome. Peer J 8: e9608
  • Wirulda Pootakham, Wuttichai Mhuantong, Thippawan Yoocha, Lalita Putchim, Nukoon Jomchai, Chutima Sonthirod, Chaiwat Naktang, Wasitthee Kongkachana, Sithichoke Tangphatsornruang (2019) Heat-induced shift in coral microbiome reveals several members of the Rhodobacteraceae family as indicator species for thermal stress in Porites lutea. MicrobiologyOpen 8: e935
  • Pakatorn Sae-Lim, Chaiwat Naktang, Thippawan Yoocha, Kanlaya Nirapathpongporn, Unchera Viboonjun, Panida Kongsawadworakul, Sithichoke Tangphatsornruang and Jarunya Narangajavana (2019) Unraveling vascular development-related genes in laticifer-containing tissue of rubber tree by high-throughput transcriptome sequencing. Current Plant Biology
    19: 100112
  • Suthasinee Somyong, Kitti Walayaporn, Nukoon Jomchai, Chaiwat Naktang, Tanapong Yodyingyong, Chalermpol Phumichai, Wirulda Pootakham, Sithichoke Tangphatsornruang (2018) Transcriptome analysis of oil palm inflorescences revealed candidate genes for an auxin signaling pathway involved in parthenocarpy. Peer J 6: e5975
  • Jittima Piriyapongsa, Pavita Kaewprommal, Yuttachon Promworn, Sirintra Vaiwsri, Warodom Wirojsirasak, Philip J Shaw, Wirulda Pootakham, Thippawan Yoocha, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Sissades Tongsima, Somvong Tragoonrung (2018) Uncovering full-length transcripts of sugarcane transcriptome using single-molecule long-read sequencing. Peer J 6: e5818
  • Wirulda Pootakham, Chaiwat Naktang, Chutima Sonthirod, Thippawan Yoocha, Duangjai Sangsrakru, Nukoon Jomchai, Lalita Putchim, Sithichoke Tangphatsornruang (2018) Development of a novel reference transcriptome for scleractinian coral Porites lutea using single-molecule long-read isoform sequencing (Iso-seq). Frontier in Marine Science 5: 122
  • Tanaporn Uengwetwanit, Pattareeya Ponza, Duangjai Sangsrakru, Duangdao Wichadakul, Supawadee Ingsriswang, Rungnapa Leelatanawit, Sirawut K Klinbunga, Sithichoke Tangphatsornruang, Nitsara Karoonuthaisiri (2017) Transcriptome-based discovery of pathways and genes related to reproduction of the black tiger shrimp (Penaeus monodon). Marine Genomics 37: 69-73
  • Wipasiri Soonthornchai, Sage Chaiyapechara, Sirawut Klinbunga, Wilawan Thongda, Sithichoke Tangphatsornruang, Thippawan Yoocha, Padermsak Jarayabhand, Pikul Jiravanichpaisal (2016) Differentially expressed transcripts in stomach of Penaeus monodon in response to AHPND infectionDevelopmental & Comparative Immunology 65:53-63
  • Kim Fooyontphanich, Fabienne Morcillo, Phillippe Amblard, Myriam Collin, Chatchawan Jantasuriyarat, Jean Luc Verdeil, Sithichoke Tangphatsornruang, Timothy J. Tranbarger (2016) A phenotypic test for delay of abscission and non-abscission oil palm fruit and validation by abscission marker gene expression analysis. Acta Horticulturae 1119: 97-104
  • Kularb Laosatit, Patcharin Tanya, Prakit Somta, Panthita Ruang-areerate, Chutima Sontirod, Sithichoke Tangphatsornruang, Piyada Juntawong, Peerasak Srinives (2016) De novo Transcriptome Analysis of Apical Meristem of Jatropha Using 454 Pyrosequencing Platform and Identification of SNP and EST-SSR Markers. Plant Molecular Biology Reporter 34(4): 786–793
  • Jeremy R. Shearman, Duangjai Sangsrakru, Nukoon Jomchai, Panthita Ruang-areerate, Chutima Sonthirod, Chaiwat Naktang, Kanikar Theerawattanasuk, Somvong Tragoonrung, Sithichoke Tangphatsornruang (2015) SNP Identification from RNA Sequencing and Linkage Map Construction of Rubber Tree for Anchoring the Draft Genome. PLoS One 10: e0121961
  • Wirulda Pootakham, Jeremy R Shearman, Panthita Ruang-areerate, Chutima Sonthirod, Duangjai Sangsrakru, Nukoon Jomchai, Thippawan Yoocha, Kanokporn Triwitayakorn, Somvong Tragoonrung, Sithichoke Tangphatsornruang. (2014) Large-scale SNP discovery through RNA-seq and SNP genotyping by targeted enrichment sequencing in cassava. PLoS One 9(12): e116028
  • Piyada Juntawong, Anchalee Sirikhachornkit, Rachaneeporn Pimjan, Chutima Sontirod, Duangjai Sangsrakru, Thippawan Yoocha, Sithichoke Tangphatsornruang, Peerasak Srinives (2014) Elucidation of the molecular responses to waterlogging in Jatropha roots by transcriptome profiling. Frontiers in Plant Science 5:658
  • Supanath Kanjanawattanawong, Sithichoke Tangphatsornruang, Kanokporn Triwitayakorn, Panthita Ruangareerate, Duangjai Sangsrakru, Suthasinee Somyong, Jarunya Narangajavana (2014) Characterization of rubber tree microRNA in phytohormone response using large genomic DNA libraries, promoter sequence and gene expression analysis. Molecular Genetics and Genomics 289(5):921-33
  • Theerapong Krajaejun, Tassanee Lerksuthirat, Gagan Garg, Tassanee Lowhnoo, Wanta Yingyong, Rommanee Khositnithikul, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Shoba Ranganathan, Thomas D Sullivan (2014) Transcriptome Analysis Reveals Pathogenicity and Evolutionary History of the Pathogenic Oomycete Pythium insidiosum. Fungal Biology 118(7): 640-53
  • Sithichoke Tangphatsornruang and John C. Gray (2014) Determination of the Half-Life of Chloroplast Transcripts in Tobacco Leaves. In Chloroplast Biotechnology: Methods and Protocols (Springer Science and Business Media, LLC, New York), Vol. 1132: 221-234
  • Jeremy R Shearman, Chatchawan Jantasuriyarat, Duangjai Sangsrakru, Thippawan Yoocha, Apichart Vannavichit, Somvong Tragoonrung and Sithichoke Tangphatsornruang (2013) Transcriptome analysis of normal and mantled oil palm flower and fruit. Genomics 101: 306-312
  • Thanate Juntadech, Kittisak Yokthongwattana, Sithichoke Tangphatsornruang, Yun-kiam Yap, Gerd Katzenmeier, Chanan Angsuthanasombat (2012) Efficient transcription of the larvicidal cry4Ba gene from Bacillus thuringiensis in transgenic chloroplasts of the green algal Chlamydomonas reinhardtii. Advances in Bioscience and Biotechnology 3: 362-369
  • Jeremy R. Shearman, Chatchawan Jantasuriyarat, Duangjai Sangsrakru, Thippawan Yoocha, Apichart Vannavichit, Sithichoke Tangphatsornruang and Somvong Tragoonrung (2012) Transcriptome assembly and expression data from normal and mantled oil palm fruit. Dataset Papers in Biology 2013: 670926
  • Kanokporn Triwitayakorn, Pornsupa Chatkulkawin, Supanath Kanjanawattanawong, Supajit Sraphet, Thippawan Yoocha, Duangjai Sangsrakru, Juntima Chanprasert, Chumpol Ngamphiw, Nukoon Jomchai, Kanikar Therawattanasuk, Sithichoke Tangphatsornruang (2011) High throughput transcriptome sequencing of Hevea brasiliensis by 454 pyrosequencing for development of microsatellite markers. DNA Research 18(6):471-82

 Genomics

  • Gareth J. Norton, Anthony Travis, Panthita Ruang-areerate, Graeme W. Nicol, Ayotunde A. Adeosun, Mahmud Hossain, M. Rafiq Islam, Alex Douglas and Adam H. Price (2021) Genetic loci regulating cadmium content in rice grains. Euphytica 217(3):35
  • Chaiwat Naktang, Chutima Sonthirod, Duangjai Sangsrakru, Sonicha U-thoomporn, Thavarit Koipokaisawan, Paiboon Panase, Methawat Tuntaisong, Wirulda Pootakham and Sithichoke Tangphatsornruang (2021) The complete mitochondrial genome sequence of the mountain crab Indochinamon bhumibol. Mitochondrial DNA Part B, 6(2): 634-635
  • Jeremy R Shearman and Sithichoke Tangphatsornruang (2021) Nanopore sequencing in agricultural and food applications. In Handbook of Nanotechnology Applications (Elsevier), pages 443-459
  • Kwanrutai Chin-inmanu, Dumrong Mairiang, Phongphak Khongthon, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Nattaya Tangthawornchaikul, Prida Malasit and Prapat Suriyaphol (2021) Genetic diversity of the dengue virus population in dengue fever and dengue hemorrhagic fever patients. Asian Pacific Journal of Allergy and Immunology doi:10.12932/AP-230620-0887
  • Paiboon Tunsagool, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Nutthee Am-in, Rungtip Chuanchuen, Taradon Luangtongkum, and Gunnaporn Suriyaphol (2021) Metagenomics of antimicrobial and heavy metal resistance in the cecal microbiome of fattening pigs raised without antibiotics. Applied and Environmental Microbiologyorg/10.1128/AEM.02684-20
  • Supaporn Khanbo, Sithichoke Tangphatsornruang, Jittima Piriyapongsa, Warodom Wirojsirasak, Prapat Punpee, Peeraya Klomsa-ard and Kittipat Ukoskit (2021) Candidate gene association of gene expression data in sugarcane contrasting for sucrose content. Genomics 113(1): 229-237
  • Wirulda Pootakham, Wanapinun Nawae, Chaiwat Naktang, Chutima Sonthirod, Thippawan Yoocha, Wasitthee Kongkachana, Duangjai Sangsrakru, Nukoon Jomchai, Sonicha Uthoomporn, Prakit Somta, Kularb Laosastit, Sithichoke Tangphatsornruang (2021) A chromosome-scale assembly of the black gram (Vigna mungo) genome. Molecular Ecology Resources 21(1): 238-250
  • Wirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Wanapinun Nawae, Thippawan Yoocha, Wasitthee Kongkachana, Duangjai Sangsrakru, Nukoon Jomchai, Sonicha U-thoomporn, John R. Sheedy, Jarunee Buaboocha, Supat Mekiyanon, Sithichoke Tangphatsornruang (2021) De novo assemblies of Luffa acutangula and Luffa cylindrica genomes reveal an expansion associated with substantial accumulation of transposable elements. Molecular Ecology Resources 21(1): 212-225
  • Pacharaporn Angthong, Tanaporn Uengwetwanit, Wirulda Pootakham, Kanchana Sittikankaew, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Intawat Nookaew, Thidathip Wongsurawat, Piroon Jenjaroenpun, Wanilada Rungrassamee, Nitsara Karoonuthaisiri (2020) Optimization of high molecular weight DNA extraction methods in shrimp for a long-read sequencing platform. Peer J 8; e10340
  • Jeremy R Shearman, Chutima Sonthirod, Chaiwat Naktang, Duangjai Sangsrakru, Thippawan Yoocha, Ratchanee Chatbanyong, Siriporn Vorakuldumrongchai, Orwintinee Chusri, Sithichoke Tangphatsornruang, Wirulda Pootakham (2020) Assembly of the durian chloroplast genome using long PacBio reads. Scientific Reports 10: 15980
  • Chutintorn Yundaeng, Wanapinun Nawae, Chaiwat Naktang, Jeremy R Shearman, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Nukoon Jomchai, John R Sheedy, Supat Mekiyanon, Methawat Tuntaisong, Wirulda Pootakham, Sithichoke Tangphatsornruang (2020) Chloroplast genome data of Luffa acutangula and Luffa aegyptiaca and their phylogenetic relationships. Data in Brief 33: 106470
  • Panthita Ruang-areerate , Jeremy Shearman , Wasitthee Kongkachana , Nukoon Jomchai , Thippawan Yoocha , Sonicha U-thoomporn , Nattapol Narong , John Robert Sheedy, Supat Mekiyanon , Wirulda Pootakham and Sithichoke Tangphatsornruang (2020) The complete mitochondrial genome of Luffa acutangula. Mitochondrial DNA Part B, 5(3): 3226-3227
  • Wirulda Pootakham, Jeremy Shearman, Sithichoke Tangphatsornruang. Development of Molecular Markers in Hevea brasiliensis for Marker-assisted Breeding (2020). In Compendium of Plant Genomes: The Rubber Genome (Springer International Publishing) Pg 55-66
  • Jeremy Shearman, Wirulda Pootakham, Sithichoke Tangphatsornruang. The BPM 24 Rubber Tree Genome, Organellar Genomes and Synteny within the Family Euphorbiaceae (2020). In Compendium of Plant Genomes: The Rubber Genome (Springer International Publishing) Pg 67-79
  • Suthasinee Somyong, Laurensia Danis Anggradita, Kitti Walayaporn, Nukoon Jomchai, Chutima Sonthirod, Sithichoke Tangphatsornruang (2020) A Growth Regulating Factor (EgGRF1) Associated with Height in Oil Palm. Chiang Mai Journal of Science 47(3): 418-30
  • Jeremy Shearman, Phanchita Vejchasarn, Chaiwat Naktang, Yotwarit Phansenee, Nukoon Jomchai, Jonaliza Siangliw, Sithichoke Tangphatsornruang, Theerayut ToojindaRice (2019) Height QTL in KDML105 Chromosome Segment Substitution Lines. Genomics 1016/j.ygeno.2019.09.003
  • WuttichaiMhuantongHandung NuryadiAgus TriantoAgus SabdonoSithichoke TangphatsornruangLily EurwilaichitrPattanop KanokratanaVerawat Champreda (2019) Comparative analysis of bacterial communities associated with healthy and diseased corals in the Indonesian sea. PeerJ 7: e8137
  • Apirak Wiseschart, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Duriya Chantasingh, Kusol Pootanakit (2019) Shotgun metagenomic sequencing from Manao-Pee cave, Thailand, reveals insight into the microbial community structure and its metabolic potential. BMC Microbiology 19(1): 144
  • Pannita Santiyanont, Kanittha Chantarasakha, Preenapha Tepkasikul, Yanee Srimarut, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Young-Gun Zo, Nipa Chokesajjawatee (2019) Dynamics of biogenic amines and bacterial communities in a Thai fermented pork product Nham. Food Research International 119: 110-118
  • Kwanrutai Chin-inmanuAroonroong SuttitheptumrongDuangjai SangsrakruDumrong MairiangSithichoke TangphatsornruangPrida MalasitPrapat Suriyaphol (2019) Complete Genome Sequences of Four Serotypes of Dengue Virus Prototype Continuously Maintained in the Laboratory. Microbiology Resource Announcements 8(19): e00199-19
  • Suthasinee Somyong, Kitti Walayaporn, Nukoon Jomchai, Siti Hajar Hassan, Tanapong Yodyingyong, Chalermpol Phumichai, Anek Limsrivilai, Arthorn Saklang, Sudprasong Suvanalert, Chutima Sonthirod, Laurensia Danis Anggradita, Sithichoke Tangphatsornruang (2019) Identifying a DELLA gene as a height controlling gene in oil palm. Chiang Mai Journal of Science 46(1): 32-45
  • Siripar Korinsak, Chatchawan Jantrasuriyarat, Wirulda Pootakham, Sujin patarapuwadol, Sithichoke Tangphatsornruang, Samart Wanchana, Apichart Vanavichit, Anucha Plabpla and Theerayut Toojinda (2019) Genome-wide association mapping of virulence gene in rice blast fungus Magnaporthe oryzae using a genotyping by sequencing approach. Genomics 111(4): 661-668
  • Sarunyou Wongwilaiwalin, Wuttichai Mhuantong, Verawat Champreda, Sithichoke Tangphatsornruang, Pornpan Panichnumsin, Khanok Ratanakhan okchai and Chakrit Tachaapaikoon (2018) Structural and metabolic adaptation of cellulolytic microcosm in co-digested Napier grass-swine manure and its application in enhancing thermophilic biogas production. Royal Scoiety of Chemistry Advances 8: 29806-29815
  • Wirulda Pootakham, Wuttichai Mhuantong, Lalita Putchim, Thippawan Yoocha, Chutima Sonthirod, Wasitthee Kongkachana, Duangjai Sangsrakru, Chaiwat Naktang, Nukoon Jomchai, Nalinee Thongtham and Sithichoke Tangphatsornruang (2018) Dynamics of coral-associated microbiomes during a thermal bleaching event. MicrobiologyOpen 7(5): e00604.
  • Thidarat Rujirawat, Preecha Patumcharoenpol, Tassanee Lohnoo, Wanta Yingyong, Yothin Kumsang, Penpan Payattikul, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Onrapak Reamtong, Gagan Garg, Weerayuth Kittichotirat and Theerapong Krajaejun (2018) Probing the Phylogenomics and Putative Pathogenicity Genes of Pythium insidiosum by Oomycete Genome Analyses. Scientific Reports 8: 4135
  • Pattanop Kanokratana, Sarunyou Wongwilaiwalin, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, and Verawat Champreda (2018) Characterization of cellulolytic microbial consortium enriched on Napier grass using metagenomic approaches. Journal of bioscience and bioengineering 125 (4): 439-447
  • Apirak Wiseschart, Wuttichai Mhuanthong, Pattamaporn Thongkam, Sithichoke Tangphatsornruang, Duriya Chantasingh, Kusol Pootanakit (2018) Bacterial Diversity and Phylogenetic Analysis of Type II Polyketide Synthase Gene from Manao-Pee Cave, Thailand. Geomicrobiology Journal 35 (6): 518-527
  • Wirulda Pootakham, Wutthichai Mhuantong, Thippawan Yoocha, Lalita Putchim, Chutima Sonthirod, Chaiwat Naktang, Nalinee Thongtham, and Sithichoke Tangphatsornruang (2017) High resolution profiling of coral-associated bacterial communities using full-length 16S rRNA sequence data from PacBio SMRT sequencing system. Scientific Reports 7: 2774
  • Vipavee Chanroj, Ratchanee Rattanawong, Thitaporn Phumichai, Sithichoke Tangphatsornruang, Kittipat Ukoskit (2017) Genome-wide association mapping of latex yield and girth in Amazonian accessions of Hevea brasiliensis grown in a suboptimal climate zone. Genomics  109 (5-6): 475-484
  • Kemika Praengam, Yuraporn Sahasakul, Piengchai Kupradinun, Siriwan Sakarin, Wanwisa Sanitchua, Anudep Rungsipipat, Kasem Rattanapinyopituk, Pornpimon Angkasekwinai, Khaimuk Changsri, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, and Siriporn Tuntipopipat (2017) Brown rice and retrograded brown rice alleviate inflammatory response in dextran sulfate sodium (DSS)-induced colitis mice. Food & Function  8 (12): 4630-4643
  • Wachiraporn  Toopaang, Suranat  Phonghanpot, Juntira  Punya, Cheerapha  Panyasiri, Kewarin Klamchao, Rudsamee  Wasuwan, Chettida  Srisuksam, Duangjai Sangsrakru, Chutima Sonthirod, Sithichoke Tangphatsornruang, Morakot  Tanticharoen, Alongkorn Amnuaykanjanasin (2017) Targeted disruption of the polyketide synthase gene pks15 affects virulence against insects and phagocytic survival in the fungus Beauveria bassiana. Fungal Biology 121 (8): 664-675
  • Naraporn Somboonna, Alisa Wilantho, Somchai Monanunsap, Suchana Chavanich, Sithichoke Tangphatsornruang, Sissades Tongsima. (2017) Microbial communities in the reef water at Kham Island, lower Gulf of Thailand. PeerJ, 5:e3625
  • Wirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Panthita Ruang-Areerate, Thippawan Yoocha, Duangjai Sangsrakru, Kanikar Theerawattanask Ratchanee Rattanawong, Napawan Lekawipat and Sithichoke Tangphatsornruang (2017) De novohybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species. Scientific Reports, 7:41457
  • Sasikarn  Nuchdang, Maneerat Khemkhao, Wuttichai  Mhuantong, Sarunyou  Wongwilaiwalin, Sithichoke  Tangphatsornruang, Verawat  Champreda, Savitri  Vatanyoopaisarn,Chan Phalakornkule (2016) Effect of freeze-thaw process on physical properties, microbial activities and population structures of anaerobic sludge. Journal of Bioscience and Bioengineering 123(4): 474-481
  • Wirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Nukoon Jomchai, Duangjai Sangsrakru, Sithichoke Tangphatsornruang (2016) Effects of methylation-sensitive enzymes on the enrichment of genic SNPs and the degree of genome complexity reduction in a two-enzyme genotyping-by-sequencing (GBS) approach: a case study in oil palm (Elaeis guineensis). Molecular Breeding 36:154
  • Jeremy R. Shearman, Chutima Sonthirod, Chaiwat Naktang, Wirulda Pootakham, Thippawan Yoocha, Duangjai Sangsrakru, Nukoon Jomchai, Somvong Tragoonrung, Sithichoke Tangphatsornruang (2016) The two chromosomes of the mitochondrial genome of a sugarcane cultivar: assembly and recombination analysis using long PacBio reads. Scientific Reports 6:31533
  • Pattanop Kanokratana, Wuttichai Mhuanthong, Thanaporn Laothanachareon, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Shawn Meyes, Verawat Champreda. Comparative study of bacterial communities in Nepenthes pitchers and their correlation to species and fluid acidity. Microbial Ecology 72(2): 381-93
  • Sarunyou Wongwilaiwalin, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Pornpan Panichnumsin, Verawat Champreda, Chakrit Tachaapaikoon (2016) Isolation of cellulolytic microcosms from bagasse compost in co-digested fibrous substrates. Biomass Conversion and Biorefinery 6(4): 421-426
  • Suthasinee Somyong, Supannee Poopear, Supreet Sunner, Kitti Walayaporn, Nukoon Jomchai, Thippawan Yoocha, Kittipat Ukoskit, Sithichoke Tangphatsornruang, Somvong Tragoonrung (2016) ACC oxidase and miRNA 159a, and their involvement in fresh fruit bunch yield (FFB) via sex ratio determination in oil palm. Molecular Genetics and Genomics 291(3): 1243-57
  • Tossawan Jitwasinkul, Prapat Suriyaphol, Sithichoke Tangphatsornruang, Martin Asser Hansen, Lars Hestbjerg Hansen, Søren Johannes Sørensen, Chairat Permpikul, Yong Rongrungruang, Chanwit Tribuddharat (2016) Plasmid metagenomics reveals multiple antibiotic resistance gene classes among the gut microbiomes of hospitalised patients. Journal of Global Antimicrobial Resistance 6: 57-66
  • Sithichoke Tangphatsornruang, Panthita Ruang-areerate, Duangjai Sangsrakru, Thidarat Rujirawat, Tassanee Lohnoo, Weerayuth Kittichotirat, Preecha Patumcharoenpol, Laura J. Grenville-Briggs, Theerapong Krajaejun (2016) Comparative mitochondrial genome analysis of Pythium insidiosum and related Oomycete species provides new insights into genetic variation and phylogenetic relationships. Gene 575(1): 34-41
  • Duangdao Wichdakul, Noppol Kobmoo, Supawadee Ingsriswang, Sithichoke Tangphatsornruang, Duriya Chantasigh, Janet Jennifer Luangsa-ard, Lily Eurwilaichitr (2015) Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi. BMC Genomics 16: 881
  • Wuttichai Mhuantong; Sarunyou Wongwilaiwalin; Thanaporn Laothanachareon; Lily Eurwilaichitr; Sithichoke Tangphatsornruang; Benjaporn Boonchayaanant; Tawan Limpiyakorn; Kobchai Pattaragulwanit; Thantip Punmatharith; John McEvoy; Eakalak Khan; Manaskorn Rachakornkij; Verawat Champreda (2015) Survey of microbial diversity in flood areas during Thailand 2011 flood crisis using high-throughput tagged amplicon pyrosequencing. PLoS One 10(5): e0128043
  • Chutintorn Yundaeng, Prakit Somta, Sithichoke Tangphatsornruang, Sompong Chankaew, and Peerasak Srinives (2015) A single base substitution in BADH/AMADH is responsible for fragrance in cucumber (Cucumis sativus), and development of SNAP markers for the fragrance. Theoretical and Applied Genetics 128: 1881-1892
  • Thidarat Rujirawat, Preecha Patumcharoenpol, Tassanee Lohnoo, Wanta Yingyong, Tassanee Lerksuthirat, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Laura Grenville-Briggs, Gagan Garg, Weerayuth Kittichotirat, and Theerapong Krajaejun (2015) Draft Genome Sequence of the Pathogenic Oomycete Pythium insidiosum Strain Pi-S, Isolated from a Patient with Pythiosis. Genome Announcements 3(3): e00574-15
  • Wirulda Pootakham, Panthita Ruang-areerate, Nukoon Jomchai, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Kanlaya Nirapathpongporn, Phayao Romruensukharom, Kanikar Theerawattanasuk, Somvong Tragoonrung and Sithichoke Tangphatsornruang (2015) Construction of a high-density integrated genetic linkage map of rubber tree (Hevea brasiliensis) using genotyping-by-sequencing (GBS). Frontiers in Plant Science 6: 367
  • Wirulda Pootakham, Nukoon Jomchai, Panthita Ruang-areerate, Jeremy R. Shearman, Chutima Sonthirod, Duangjai Sangsrakru, Somvong Tragoonrung and Sithichoke Tangphatsornruang (2015) Genome-wide SNP discovery and identification of QTL associated with agronomic traits in oil palm using genotyping-by-sequencing (GBS). Genomics 105: 288-295
  • Wuttichai Mhuantong, Varodom Charoensawan, Pattanop Kanokratana, Sithichoke Tangphatsornruang and Verawat Champreda (2015) Comparative Analysis of Sugarcane Bagasse Metagenome Reveals Unique and Conserved Biomass-Degrading Enzymes among different Lignocellulolytic Microbial Communities. Biotechnology for Biofuels 8:16
  • Suthasinee Somyong, Supannee Poopear, Nukoon Jomchai, Pichahpuk Uthaipaisanwong, Panthita Ruang-areerate, Duangjai Sangsrakru, Chutima Sonthirod, Kittipat Ukoskit, Somvong Tragoonrung, Sithichoke Tangphatsornruang. (2015) The AKR gene family and modifying sex ratios in palms through abiotic stress responsiveness. Functional and Integrative Genomics 15(3): 349-362
  • Naraporn Somboonna, Anunchai Assawamakin, Alisa Wilantho, Somchai Monanunsap, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Sissades Tongsima. (2014) Microbial and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand. BMC Genomics 15: 607
  • Jeremy R. Shearman, Duangjai Sangsrakru, Panthita Ruang-areerate, Chutima Sontirod, Pichapuk Uthaipaisanwong, Thipawan Yoocha, Kanikar Theerawattanasuk, Somvong Tragoonrung, Sithichoke Tangphatsornruang (2014) Assembly and analysis of a male sterile rubber tree mitochondrial genome reveals DNA rearrangement events and a novel transcript. BMC Plant Biology 14: 5
  • Naraporn Somboonna, Kruawun Jankaew, Anunchai Assawamakin, Alisa Wilantho, Sithichoke Tangphatsornruang, Sissades Tongsima (2014) Microbial ecology of Thailand tsunami and non-tsunami affected terrestrials. PLoS One 9(4): e94236
  • Kittipat Ukoskit, Vipavee Chanroj, Ganlayarat Bhusudsawang, Kwanjai Pipatchartlearnwong, Sithichoke Tangphatsornruang and Somvong Tragoonrung (2014) The oil palm (Elaeis guineensis) linkage map, and quantitative trait locus analysis for sex ratio and related traits Molecular Breeding 33(2): 415-424
  • Thanwanit Thanyasiriwat, Supajit Sraphet, Sukhuman Whankaew, Opas Boonseng, Jinsong Bao, David A. Lightfoot, Sithichoke Tangphatsornruang and Kanokporn Triwitayakorn (2014) Loci and Candidate Genes Underlying Starch Pasting Viscosity Characteristics in Cassava (Manihot esculenta Crantz). Plant Biology 16(1): 197-207
  • Wirulda Pootakham, Pichahpuk Uthaipaisanwong, Duangjai Sangsrakru, Thippawan Yoocha, Somvong Tragoonrung and Sithichoke Tangphatsornruang (2013) Development and Characterization of single nucleotide polymorphism markers from 454 transcriptome sequences in oil palm (Elaeis guineensis). Plant Breeding 132(6) 711-717
  • Chutintorn Yundaeng, Sithichoke Tangphatsornruang, Prakit Somta, Sugunya Wongpornchai and Peerasak Srinives (2013) Gene discovery and functional marker development for fragrance in sorghum (Sorghum bicolor (L.) Moench). Theoretical and Applied Genetics 126(11): 2897-2906
  • Wanilada Rungrassamee, Amornpan Klanchui, Sage Chaiyapechara, Sawarot Maibunkaew, Sithichoke Tangphatsornruang, Pikul Jiravanichpaisal, Nitsara Karoonuthaisiri (2013) Bacterial population in intestines of the black tiger shrimp (Penaeus monodon) under different growth stages. PLoS One 2013; 8(4): e60802.
  • Sarunyou Wongwilaiwalin, Thanaporn Laothanachareon, Wuttichai Mhauntong, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Yasuo Igarashi, and Verawat Champreda (2013) Comparative metagenomic analysis of microcosm structures and lignocellulolytic enzyme systems of symbiotic biomass-degrading consortia. Applied Microbiology and Biotechnology 97(20): 8941-54
  • Pattanop Kanokratana, Wuttichai Mhuanthong, Thanaporn Laotanachareon, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Kusol Pootanakit, Verawat Champreda (2013) Phylogenetic analysis and metabolic potential of microbial communities in an industrial bagasse collection site Microbial Ecology 66(2):322-34
  • Honglada Thoetkiattikul, Wuttichai Mhuantong, Thanaporn Laothanachareon, Virote Pattarajinda, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Verawat Champreda (2013) Comparative analysis of microbial profiles in cow rumen fed with different dietary fiber by tagged 16S rRNA gene pyrosequencing. Current Microbiology 67(2):130-7
  • Kwanrutai Chin-Inmanu, Aroonroong Suttitheptumrong, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Somvong Tragoonrung, Prida Malasit, Sumalee Tungpradabkul and Prapat Suriyaphol (2012) Feasibility of using 454 pyrosequencing for studying quasispecies of whole dengue viral genome. BMC Genomics 13 (Suppl 7): S7
  • Naraporn Somboonna, Anunchai Assawamakin, Alisa Wilantho, Sithichoke Tangphatsornruang and Sissades Tongsima (2012) Metagenomic profiles of free-living archaea, bacteria and small eukaryotes in coastal areas of Sichang island, Thailand. BMC Genomics 13 (Suppl 7): S29
  • Wirulda Pootakham, Juntima Chanprasert, Nukoon Jomchai, Duangjai Sangsrakru, Thippawan Yoocha, Kanikar Therawattanasuk, and Sithichoke Tangphatsornruang (2012) Development of genomic-derived simple sequence repeat markers in Hevea brasiliensis from 454 genome shotgun sequences. Plant Breeding 131(4): 555-562
  • Pichahpuk Uthaipaisanwong, Juntima Chanprasert, Jeremy R. Shearman, Duangjai Sangsrakru, Thippawan Yoocha, Nukoon Jomchai, Chatchawan Jantasuriyarat, Somvong Tragoonrung and Sithichoke Tangphatsornruang (2012) The chloroplast genome sequence of oil palm (Elaeis guineensis): gene annotation and phylogenetic relationships. Gene 500(2): 172-180
  • Supapon Cheevadhanarak, Kalyanee Paithoonrangsarid, Peerada Prommeenate, Warunee Kaewngam, Apiluck Musigkain, Somvong Tragoonrung, Satoshi Tabata, Takakazu Kaneko, Jeerayut Chaijaruwanich, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Juntima Chanprasert, Sissades Tongsima, Kanthida Kusonmano, Wattana Jeamton, Sudarat Dulsawat, Amornpan Klanchui, Tayvich Vorapreeda, Vasunun Chumchua, Chiraphan Khannapho, Chinae Thammarongtham, Vethachai Plengvidhya, Sanjukta Subudhi, Apiradee Hongsthong, Marasri Ruengjitchatchawalya, Asawin Meechai, Jittisak Senachak, Morakot Tanticharoen (2012) Draft genome sequence of Arthrospira platensis C1 (PCC9438) Standards in Genomic Sciences 6(1): 43-53
  • Marutpong Panya, Viraphong Lulitanond, Sithichoke Tangphatsornruang, Wises Namwat, Rungnapha Wannasutta, Namfon Suebwongsa, and Baltasar Mayo (2012) Sequencing and analysis of three plasmids from Lactobacillus casei TISTR1341 and the development of plasmid-derived Escherichia coli-L. casei shuttle vectors. Applied Microbiology and Biotechnology 93(1): 261-72
  • Wirulda Pootakham, Juntima Chanprasert, Nukoon Jomchai, Duangjai Sangsrakru, Thippawan Yoocha, Somvong Tragoonrung, and Sithichoke Tangphatsornruang (2011) Single nucleotide polymorphism marker development in rubber tree, Hevea brasiliensis (Euphorbiaceae). American Journal of Botany 98(11): e337-8
  • Sukhuman Whankaew, Supannee Poopear, Supanath Kanjanawattanawong, Sithichoke Tangphatsornruang, Opas Boonseng, David A. Lightfoot and Kanokporn Triwitayakorn (2011) A genome scan for quantitative trait loci affecting cyanogenic potential of cassava root in an outbred population. BMC Genomics, 12: 266
  • Supajit Sraphet, Athipong Boonchanawiwat, Thanwanit Thanyasiriwat, Opas Boonseng, Satoshi Tabata, Shigemi Sasamoto, Kenta Shirasawa, Sachiko Isobe, David A Lightfoot, Sithichoke Tangphatsornruang, Kanokporn Triwitayakorn (2011) SSR and EST-SSR based genetic linkage map of cassava (Manihot esculenta Crantz). Theoretical and Applied Genetics 122(6): 1161-1170
  • Sithichoke Tangphatsornruang, Duangjai Sangsrakru, Juntima Chanprasert, Pichahpuk Uthaipaisanwong, Thippawan Yoocha, Nukoon Jomchai and Somvong Tragoonrung (2011) Characterization of the complete chloroplast genome sequence of Hevea brasiliensis reveals genome rearrangement, RNA editing sites and phylogenetic relationships among angiosperms. Gene 475(2): 104-112
  • Pattanop Kanokratana, Tanaporn Uengwetwanit, Ukrit Rattanachomsri, Benjarat Bunterngsook, Thidarat Nimchua, Sithichoke Tangphatsornruang, Vethachai Plengvidhya, Verawat Champreda, Lily Eurwilaichitr (2011) Insights into the phylogeny and metabolic potential of a primary tropical peat swamp forest microbial community by metagenomic analysis. Microbial Ecology 61(3): 518-528
  • Suparat KunKeaw, Thippawan Yoocha, Supajit Sraphet, Athipong Boonchanawiwat, Opas Boonseng, David A. Lightfoot, Kanokporn Triwitayakorn, and Sithichoke Tangphatsornruang (2010) Construction of a genetic linkage map using simple sequence repeat markers from expressed sequence tags for cassava (Manihot esculenta Crantz). Molecular Breeding 27 (1) 67-75
  • Sithichoke Tangphatsornruang, Duangjai Sangsrakru, Juntima Chanprasert, Pichahpuk Uthaipaisanwong, Thippawan Yoocha, Nukoon Jomchai, Somvong Tragoonrung (2010) The complete plastid genome sequence of Vigna radiata for studies in structural organization and phylogenetic relationship. DNA Research, 17: 11-22
  • Suparat Kunkeaw, Sithichoke Tangphatsornruang, Duncan R. Smith and Kanokporn Triwitayakorn (2010) Genetic linkage map of cassava (Manihot esculenta Crantz) based on AFLP and SSR markers. Plant Breeding 129: 112-115
  • Sithichoke Tangphatsornruang, Prakit Somta, Pichahpuk Uthaipaisanwong, Juntima Chanprasert, Duanjai Sangsrakru, Worapa Seehalak, Warunee Sommanas, Somvong Tragoonrung and Peerasak Srinives (2009) Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek). BMC Plant Biology, 9: 137